| HMMscan | nr | KOG | KEGG | PDB | ITAG2.3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SNP ID | Array type ( I: Infinium G: Goldengate) |
Chromosome | Position on the SL2.40 | Location | IUPAC | SNP genotype (Heinz 1706-BG) | SNP genotype (Mutation) | Strand | Codon (Heinz 1706-BG) | Codon (Mutation) | Amino acid residue (Heinz 1706-BG) | Amino acid residue (Mutation) | SNP category | ITAG gene model | Functional site | Flanking sequences on SNP | HZ (The 40 lines) | HZ (cluster 1) | HZ (cluster 2) | HZ (cluster 3) | HZ (cluster 4) | San Marzano | Rutgers | Ponderosa | Aichi First | S. lycopersicum var cerasiforme (WIR25/30) | S. lycopersicum var cerasiforme (TOMJPF00009) | Earliana | Best Of All | Money Maker | Ailsa Craig | LA925 | Fruit | Rio Grande | Marglobe | Heinz 1706-BG | Tomato Chuukanbohon Nou 9 | Furikoma | Tomato Chuukanbohon Nou 11 | Reika | Momotaro 8 | Labell | Matrix | Geronimo | Micro-Tom_AM | Micro-Tom TGRC (LA3911) | Micro-Tom_MM | Micro-Tom | Micro-Tom NBRP (TOMJPF00001) | M82_MM | M82 | Regina | Sweet100 | S. pimpinellifolium (TOMJPF00012) | S. pimpinellifolium (LS1513) | S. pimpinellifolium (PI344102) | S. chilense (LA1958) | S. peruvianum (WIR2020) | S. peruvianum (TOMJPF00010) | S. pennellii (TOMJPF00008) | S. pennellii (LA716) | E-value | Model | HMMscan definition | nr definition | Product (KDRI) | E-value | Length% | Identity% | Positive% | KOG id | KOG No. | KOG definition | E-value | Length% | Identity% | Positive% | KO | E-value | Length% | Identity% | Positive% | Gene name [structural model (tomato)] (Structures with links can be browsed by Jmol.) |
PDB id | PDB definition | E-value | Length% | Identity% | Positive% | ITAG (interpro) |
| solcap_snp_sl_56930 | I | SL2.40ch02 | 331954 | genome | K | G | T | # | # | # | # | # | gSNP | # | # | AGGCGGGGGCACGCGTTTCCGCCCTGGTGTCGTGAGATTGAGCCACGCAA[T/G]GTCCAGAGGACGAACAAATTGATCTGAGGCATCAATTTCCTTTTTCCTCT | 0.32 | 0.44 | 0 | 0 | 0 | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | GG | TT | TT | TT | TT | TT | GG | GG | GG | GG | GG | TT | TT | -- | -- | -- | -- | -- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | # |
| solcap_snp_sl_7398 | I | SL2.40ch02 | 1511764 | exon | Y | T | C | - | Aac | Gac | N | D | cSNP | Solyc02g005200.2.1 | # | GGAAAACCTTGTACTCTATTTATCAAGTTATACAGGAGGAGGTGGCAGGT[T/C]TAACAAAAGCCAGAATCCAACACAATCATCCGAATTCAGGTCATTTTGAA | 0.44 | 0 | 0 | 0 | 0 | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | CC | CC | CC | CC | CC | TT | TT | TT | TT | CC | CC | CC | CC | CC | CC | CC | CC | - | - | - | - | - | - | - | - | - | - | noCOG | 1.00E-150 | 102.5 | 67.7 | 79.7 | - | - | - | - | - | Solyc02g005200.2.1 | - | - | - | - | - | - | Name=IPR009472;Note=Protein of unknown function DUF1092 | |
| CL009078-0683 | I | SL2.40ch02 | 1579524 | intron | W | T | A | - | # | # | # | # | iSNP | Solyc02g005210.2.1 | # | TTACCTTTGAGCAACTTTTACCTTATAATATTAGAATTGGACAATTGCATCCTTTAGCTGTAATGGATGTGAATAACNAGTGTTTAACGTCTTTGGCCTT[A/T]AATGGCAGCAAACTGTGTCATTGGCTGCATGAACTTGTCTTTTCTCATGTTTATTATTGCAATGTTATTTTCAGCTGANNCTG | 0.1 | 0.38 | 0 | 0 | 0 | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | TT | TT | - | - | - | - | - | - | - | - | - | - | noCOG | 3.00E-89 | 103.5 | 67.4 | 77.1 | - | - | - | - | - | Solyc02g005210.2.1 | - | - | - | - | - | - | # | |
| SL10351_878 | I | SL2.40ch02 | 1579833 | intron | W | A | T | - | # | # | # | # | iSNP | Solyc02g005210.2.1 | # | CTGCATTCAAAAATTCACCATCAATTACAAACCAAACCCAAACCCAACAG[A/T]AACAAAGAATCAAACGAAATAAATAACCTTGGATTTAACAGATCGTTTAA | 0.32 | 0.47 | 0 | 0 | 0 | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | TT | TT | TT | TT | TT | AA | AA | AA | AA | TT | TT | TT | AA | AA | AA | AA | AA | - | - | - | - | - | - | - | - | - | - | noCOG | 3.00E-89 | 103.5 | 67.4 | 77.1 | - | - | - | - | - | Solyc02g005210.2.1 | - | - | - | - | - | - | # | |
| solcap_snp_sl_19822 | I | SL2.40ch02 | 1580155 | exon | Y | T | C | - | aaA | aaG | K | K | sSNP | Solyc02g005210.2.1 | # | TTCTGTACACTCTGTAAACTCCACGGAAGAGAGACAGGAGAGAGTACAAG[T/C]TTTGCTGCCATGGAACTGTTTGGTGCCAATCAACAAAACACCCAAATGTG | 0.27 | 0 | 0 | 0.5 | 0.29 | TT | CC | TT | TT | TT | TT | TT | TT | TT | CC | CC | TT | TT | TT | TT | TT | TT | TT | TT | TT | CC | TC | CC | TT | TT | TT | TT | TT | TT | TT | TT | CC | TT | TT | TT | TT | TT | TT | TT | TT | - | - | - | - | - | - | - | - | - | - | noCOG | 3.00E-89 | 103.5 | 67.4 | 77.1 | - | - | - | - | - | Solyc02g005210.2.1 | - | - | - | - | - | - | # | |
| solcap_snp_sl_56940 | I | SL2.40ch02 | 2054107 | genome | R | A | G | # | # | # | # | # | gSNP | # | # | TCCCCCTAAAATCAGCCCTAGTCTCACTCTATATGAGCTCTTTTCTTTTT[A/G]AGTTTTGGAGGTTGGAGAAAATTGTTAGAAGAAAATAGTGAGAAATACAA | 0.44 | 0 | 0 | 0 | 0 | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | GG | GG | GG | GG | GG | AA | AA | AA | AA | GG | GG | GG | GG | GG | GG | GG | GG | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | # |
| solcap_snp_sl_7408 | I | SL2.40ch02 | 2069977 | genome | R | A | G | # | # | # | # | # | gSNP | # | # | ACCTGGATTCCGTACAAATGGATAAGCAGAGAGGGAGAAGACAATGCGCT[A/G]CGCGGCTGGAATAACGCTCTGGTTCGCGTCTGGAGAAGAGGAAGAAACGT | 0.32 | 0.47 | 0 | 0 | 0 | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | GG | GG | GG | GG | GG | AA | AA | AA | AA | GG | GG | GG | AA | AA | AA | AA | AA | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | # |
| solcap_snp_sl_7410 | I | SL2.40ch02 | 2309824 | exon | R | A | G | - | gTa | gCa | V | A | cSNP | Solyc02g005350.2.1 | # | GAGGAACATAAACCACTGAAGCATTAGCCTTTGTCTCTACTTTTGCCTCT[A/G]CAACAGTATTAAAAACAGGTAGCCCCAAATGTTCTGTTCCACCCTTCTTG | 0.36 | 0 | 0 | 0.5 | 0.46 | AA | AA | GG | GG | GG | GG | AA | GG | GG | AA | AA | GG | GG | GG | AA | GG | GG | GG | GG | GG | AA | AG | AA | GG | GG | GG | GG | GG | GG | GG | GG | AA | GG | GG | GG | GG | GG | GG | GG | GG | 3.90E-30 | CoA_binding | CoA binding domain | gi|350537933|ref|NP_001234574.1| succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial [Solanum lycopersicum]gi|75120763|sp|Q6DQL1.1|SUCA2_SOLLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial; Short=SlSCoALalpha2; Flags: Precursorgi|49617539|gb|AAT67464.1| succinyl-CoA ligase alpha 2 subunit [Solanum lycopersicum] | succinyl-CoA ligase | 0 | 100.0 | 99.7 | 99.7 | C | KOG1255 | Succinyl-CoA synthetase, alpha subunit | 1.00E-160 | 101.2 | 83.1 | 88.7 | K01899_ath-AT5G08300 | 1.00E-158 | 103.0 | 82.5 | 88.7 | Solyc02g005350.2.1 | 1JKJ | gi|18655523|pdb|1JKJ|A Chain A, E. Coli Scsgi|18655525|pdb|1JKJ|D Chain D, E. Coli Scsgi|18655527|pdb|1JLL|A Chain A, Crystal Structure Analysis Of The E197betaa Mutant Of E. Coli Scsgi|18655529|pdb|1JLL|D Chain D, Crystal Structure Analysis Of The E197betaa Mutant Of E. Coli Scs | 1.00E-106 | 85.5 | 57.3 | 67.1 | Name=IPR016102;Note=Succinyl-CoA synthetase-like |
| solcap_snp_sl_28320 | I | SL2.40ch02 | 6139638 | exon | Y | T | C | + | Ttg | Ctg | L | L | sSNP | Solyc02g014030.1.1 | # | ATTCGATTCACCCATGCTTGGTTGGAAGAATATCACCTGACTGCTTTGAG[T/C]TGTTTCTAGATACTGCAATCAACTGCCTGCACGATGAGGGTAACAAACGT | 0.44 | 0 | 0 | 0 | 0 | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | CC | CC | CC | CC | CC | TT | TT | TT | TT | CC | CC | CC | CC | CC | CC | CC | CC | 3.20E-67 | Pkinase_Tyr | Protein tyrosine kinase | gi|255580328|ref|XP_002530992.1| kinase, putative [Ricinus communis]gi|223529419|gb|EEF31380.1| kinase, putative [Ricinus communis] | kinase, putative | 1.00E-172 | 78.5 | 31.3 | 43.5 | T | KOG1187 | Serine/threonine protein kinase | 1.00E-157 | 75.8 | 29.3 | 41.2 | K04733_ath-AT5G38990 | 1.00E-146 | 76.4 | 29.2 | 40.9 | Solyc02g014030.1.1 | 3HGK | gi|241913441|pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Ptogi|241913442|pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Ptogi|241913443|pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Ptogi|241913444|pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto | 2.00E-67 | 28.4 | 12.6 | 16.4 | Name=G3DSA:1.10.510.10;length=198;Note=no description;Dbxref=GENE3D:G3DSA:1.10.510.10;database=GENE3D |
| solcap_snp_sl_2559 | I | SL2.40ch02 | 6283284 | 5utr | R | A | G | + | # | # | # | # | rSNP | Solyc02g014090.2.1 | # | TGTTCGGGAAATTGCTGAGTAGTTTTTTCTTGTTTGTTTGTTGTGGGGGT[A/G]GGGGTTATGGATTGGGAAGGGAGAGTGAATGGAGGAGATTGTAATCTGAC | 0.48 | 0 | 0 | 0 | 0.36 | AA | AA | AA | AA | GG | GG | AA | AA | AA | AA | AA | AA | GG | AA | AA | GG | AA | AA | AA | AA | AA | AA | AA | GG | GG | GG | GG | GG | AA | AA | AA | AA | GG | GG | GG | -- | GG | GG | GG | GG | - | - | - | - | - | - | - | - | - | - | noCOG | 2.00E-50 | 76.6 | 37.3 | 49.3 | - | - | - | - | - | Solyc02g014090.2.1 | - | - | - | - | - | - | # | |
| solcap_snp_sl_17448 | I | SL2.40ch02 | 6355293 | exon | W | T | A | - | Act | Tct | T | S | cSNP | Solyc02g014130.1.1 | # | CCGTGTAGACATGCTTTCAACAGGATTACCAGGCACATGAGCAGGTTCAG[A/T]CATCGAGGAACTAGACTTTGGCGTCGTTTTTTTCCTTTCATTGGTAGAAA | 0.27 | 0 | 0 | 0.5 | 0.29 | TT | AA | TT | TT | TT | TT | TT | TT | TT | AA | AA | TT | TT | TT | TT | TT | TT | TT | TT | TT | AA | TA | AA | TT | TT | TT | TT | TT | TT | TT | TT | AA | TT | TT | TT | TT | TT | TT | TT | TT | - | - | - | gi|297808313|ref|XP_002872040.1| enhancer of ag-4 2 [Arabidopsis lyrata subsp. lyrata]gi|297317877|gb|EFH48299.1| enhancer of ag-4 2 [Arabidopsis lyrata subsp. lyrata] | enhancer of ag-4 2 | 0 | 100.1 | 34.8 | 46.3 | K | KOG1904 | Transcription coactivator | 0 | 99.7 | 34.7 | 45.0 | - | - | - | - | - | Solyc02g014130.1.1 | - | - | - | - | - | - | Name=PR01217;length=26;Note=PRICHEXTENSN;Dbxref=PRINTS:PR01217;database=PRINTS |
| solcap_snp_sl_2561 | I | SL2.40ch02 | 6519279 | exon | K | T | G | + | Tca | Gca | S | A | cSNP | Solyc02g014150.2.1 | # | CCCGTCCTCTTCTTCCCCATAACTTTCCACCTCGGTTGCCTTTATGCAGA[T/G]CAGCTAATATTAACCGCAGACAGTTGATTGCTGACACTGCTGCTGCCATT | 0.44 | 0 | 0 | 0 | 0 | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | GG | GG | GG | GG | GG | TT | TT | TT | TT | GG | GG | GG | GG | GG | GG | GG | GG | - | - | - | gi|148251625|gb|ABQ53629.1| plastid high chlorophyll fluorescence 136 precursor [Zea mays] | plastid high chlorophyll fluorescence 136 precursor | 1.00E-165 | 104.5 | 76.9 | 85.7 | R | KOG3511 | Sortilin and related receptors | 1.00E-159 | 106.9 | 71.4 | 77.5 | - | - | - | - | - | Solyc02g014150.2.1 | 2XBG | gi|328877072|pdb|2XBG|A Chain A, Crystal Structure Of Ycf48 From Thermosynechococcus Elongatus | 3.00E-69 | 86.7 | 34.5 | 49.6 | Name=IPR016705;Note=Photosystem II stability/assembly factor%2C HCF136 |
| solcap_snp_sl_2563 | I | SL2.40ch02 | 6570455 | exon | Y | T | C | - | gcA | gcG | A | A | sSNP | Solyc02g014170.2.1 | # | ATTGTTGTTTCCAGTAATGATTGCTTTTCCACGTCCATACTGATTCCTGC[T/C]GCAGAAAGCATCTCCTGAACTGCCTGGACCAATTCTGTAGCAGACACTCG | 0.44 | 0 | 0 | 0 | 0 | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | CC | CC | CC | CC | CC | TT | TT | TT | TT | CC | CC | CC | CC | CC | CC | CC | CC | - | - | - | gi|255572407|ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]gi|223533501|gb|EEF35243.1| protein binding protein, putative [Ricinus communis] | protein binding protein, putative | 0 | 753.8 | 60.9 | 75.2 | - | noCOG | 0 | 754.2 | 54.0 | 73.1 | - | - | - | - | - | Solyc02g014170.2.1 | - | - | - | - | - | - | Name=IPR018957;Note=Zinc finger%2C C3HC4 RING-type | |
| solcap_snp_sl_2564 | I | SL2.40ch02 | 6572303 | exon | M | C | A | - | acG | acT | T | T | sSNP | Solyc02g014170.2.1 | # | CAATCATTATCAGGGACAATTGCTTCAGAATGCCAACTGCTCATGTCCGA[A/C]GTGTTTGCCTGATCACAGATGAAATGCACAATTCCCATCACAGCACGGAA | 0.42 | 0.22 | 0 | 0 | 0 | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | AA | AA | AA | AA | AA | CC | CC | CC | CC | AA | AA | AA | AA | AC | AC | AA | AA | - | - | - | gi|255572407|ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]gi|223533501|gb|EEF35243.1| protein binding protein, putative [Ricinus communis] | protein binding protein, putative | 0 | 753.8 | 60.9 | 75.2 | - | noCOG | 0 | 754.2 | 54.0 | 73.1 | - | - | - | - | - | Solyc02g014170.2.1 | - | - | - | - | - | - | Name=IPR018957;Note=Zinc finger%2C C3HC4 RING-type | |
| solcap_snp_sl_2565 | I | SL2.40ch02 | 6580104 | exon | W | T | A | - | atA | atT | I | I | sSNP | Solyc02g014180.1.1 | # | TTCAAAATGCGTAGCCATCCTTCGGAGATAAACCTTTCTCCAGGAAATTT[A/T]ATTCTCATGCCTGAGAACACTGATGTTAATAAAGCATCACTGGGATCAAA | 0.39 | 0 | 0 | 0 | 0 | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | AA | AA | AA | AA | AA | TT | TT | TT | TT | AA | AA | AA | -- | -- | -- | AA | AA | - | - | - | gi|255572407|ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]gi|223533501|gb|EEF35243.1| protein binding protein, putative [Ricinus communis] | protein binding protein, putative | 0 | 383.4 | 56.7 | 68.9 | - | noCOG | 0 | 383.5 | 52.8 | 68.6 | - | - | - | - | - | Solyc02g014180.1.1 | - | - | - | - | - | - | # | |
| solcap_snp_sl_2570 | I | SL2.40ch02 | 6597304 | exon | M | A | C | - | Ttg | Gtg | L | V | cSNP | Solyc02g014190.2.1 | # | AGACTCAAATATTAAGCTATCCATGTTGCAATCTGCAATTGCTTCTAGCA[A/C]GTGATTGACAAAACTCAGTTGATCGGCAGAAAGGGGGAATCCTTTCACAT | 0.44 | 0 | 0 | 0 | 0 | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | CC | CC | CC | CC | CC | AA | AA | AA | AA | CC | CC | CC | CC | CC | CC | CC | CC | - | - | - | gi|255572407|ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]gi|223533501|gb|EEF35243.1| protein binding protein, putative [Ricinus communis] | protein binding protein, putative | 0 | 157.9 | 63.5 | 79.0 | - | noCOG | 0 | 157.9 | 61.0 | 77.1 | - | - | - | - | - | Solyc02g014190.2.1 | - | - | - | - | - | - | Name=IPR003594;Note=ATP-binding region%2C ATPase-like | |
| solcap_snp_sl_2572 | I | SL2.40ch02 | 6599877 | exon | R | A | G | - | gaT | gaC | D | D | sSNP | Solyc02g014190.2.1 | # | GCCGTGGGAGGCTGGACATAACGCATTAATTGGGGATGGTCTATTGGGAC[A/G]TCACGCGTCAAAGTCAGGCATCCAACACGCAGCAAAAGTGATGACATATT | 0.44 | 0 | 0 | 0 | 0 | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | GG | GG | GG | GG | GG | AA | AA | AA | AA | GG | GG | GG | GG | GG | GG | GG | GG | - | - | - | gi|255572407|ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]gi|223533501|gb|EEF35243.1| protein binding protein, putative [Ricinus communis] | protein binding protein, putative | 0 | 157.9 | 63.5 | 79.0 | - | noCOG | 0 | 157.9 | 61.0 | 77.1 | - | - | - | - | - | Solyc02g014190.2.1 | - | - | - | - | - | - | Name=IPR003594;Note=ATP-binding region%2C ATPase-like | |
| solcap_snp_sl_44555 | I | SL2.40ch02 | 6610132 | exon | Y | C | T | - | cGg | cAg | R | Q | cSNP | Solyc02g014190.2.1 | # | TAGACGGTGAAGACAATCTTTGTACTATATAAAACCTATCAGTTCTCTTC[T/C]GAGGATGACTCCCATTGACCGCCTCGCTCAAGAATTCCAATGAAAAGGTA | 0.44 | 0 | 0 | 0 | 0 | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | CC | TT | TT | TT | TT | TT | CC | CC | CC | CC | TT | TT | TT | TT | TT | TT | TT | TT | - | - | - | gi|255572407|ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]gi|223533501|gb|EEF35243.1| protein binding protein, putative [Ricinus communis] | protein binding protein, putative | 0 | 157.9 | 63.5 | 79.0 | - | noCOG | 0 | 157.9 | 61.0 | 77.1 | - | - | - | - | - | Solyc02g014190.2.1 | - | - | - | - | - | - | Name=IPR003594;Note=ATP-binding region%2C ATPase-like | |
| solcap_snp_sl_2575 | I | SL2.40ch02 | 6610291 | exon | Y | T | C | - | cAg | cGg | Q | R | cSNP | Solyc02g014190.2.1 | # | GCCAAATGGTATCACTGTTGTCGGAGTTCACAGAGCAGGAATATGTCTTC[T/C]GTGGCTCGGCCAAACCAACATCCCATTCATATATCTCTATTGATAATACA | 0.42 | 0.22 | 0 | 0 | 0 | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | TT | CC | CC | CC | CC | CC | TT | TT | TT | TT | CC | CC | CC | CC | TC | TC | CC | CC | - | - | - | gi|255572407|ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]gi|223533501|gb|EEF35243.1| protein binding protein, putative [Ricinus communis] | protein binding protein, putative | 0 | 157.9 | 63.5 | 79.0 | - | noCOG | 0 | 157.9 | 61.0 | 77.1 | - | - | - | - | - | Solyc02g014190.2.1 | - | - | - | - | - | - | Name=IPR003594;Note=ATP-binding region%2C ATPase-like | |
| solcap_snp_sl_44556 | I | SL2.40ch02 | 6611630 | exon | R | A | G | - | Ttg | Ctg | L | L | sSNP | Solyc02g014190.2.1 | # | GTAAGCTAAAAGAGCAGGGCCTTGCCACTGTGCAAGCTTATCAGAGAGCA[A/G]TGACTCGGTCCCGTGATTTCGGCGGTCAAGGCAGAGGCAAACTTTGGTAG | 0.29 | 0.38 | 0 | 0 | 0 | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | AA | GG | GG | GG | GG | GG | AA | AA | AA | AA | AA | GG | GG | AA | AA | AA | AA | AA | - | - | - | gi|255572407|ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]gi|223533501|gb|EEF35243.1| protein binding protein, putative [Ricinus communis] | protein binding protein, putative | 0 | 157.9 | 63.5 | 79.0 | - | noCOG | 0 | 157.9 | 61.0 | 77.1 | - | - | - | - | - | Solyc02g014190.2.1 | - | - | - | - | - | - | Name=IPR003594;Note=ATP-binding region%2C ATPase-like | |
| 1 |