Dca10019.1
Annotation
- 2-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1434)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10019.1 |
1 |
520 |
547 |
57.22 |
520 |
58 |
3e-176
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
560 |
1098 |
1788 |
30.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca10019.1 |
233 |
510 |
547 |
16.81 |
278 |
33 |
1e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
229 |
488 |
707 |
36.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1434 |
Augustus |
mRNA |
39554 |
41280 |
. |
- |
. |
ID=Dca10019.1;Parent=Dca10019 |
| scaffold1434 |
Augustus |
exon |
39554 |
40856 |
. |
- |
. |
ID=Dca10019.1.exon1;Parent=Dca10019.1 |
| scaffold1434 |
Augustus |
exon |
40940 |
41280 |
. |
- |
. |
ID=Dca10019.1.exon2;Parent=Dca10019.1 |
