Carnation DB

Dca10152.1

Annotation

5-exons
f-1
sp|F6GVR1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0083g00220#GO:0003676;GO:0008270#2F0P0C
sp|B9SJ03_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0597470#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold1441)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10152.1	1	385	387	54	385	53	1e-97
Target_name	Start	End	Length	Cov(%)
sp\|F6GVR1_VITVI	214	603	629	62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10152.1	1	331	387	44.96	331	51	2e-82
Target_name	Start	End	Length	Cov(%)
AT5G38600.1	159	480	532	60.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1441	Augus-PASA	mRNA	128186	135297	.	-	.	ID=Dca10152.1;Parent=Dca10152
scaffold1441	Augus-PASA	exon	128186	128817	.	-	.	ID=Dca10152.1.exon1;Parent=Dca10152.1
scaffold1441	Augus-PASA	exon	129570	129633	.	-	.	ID=Dca10152.1.exon2;Parent=Dca10152.1
scaffold1441	Augus-PASA	exon	129937	130186	.	-	.	ID=Dca10152.1.exon3;Parent=Dca10152.1
scaffold1441	Augustus	exon	132838	132974	.	-	.	ID=Dca10152.1.exon4;Parent=Dca10152.1
scaffold1441	Augustus	exon	135217	135297	.	-	.	ID=Dca10152.1.exon5;Parent=Dca10152.1