Carnation DB

Dca10202.1

Annotation

17-exons
f-1531
sp|B9HFA9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1083676#GO:0050660;GO:0008762#2F0P0C
AT4G36400.1 | Symbols: | FAD-linked oxidases family protein | chr4:17197265-17200472 FORWARD LENGTH=559
Repeat List (scaffold1444)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10202.1	1	417	417	31.41	417	30	8e-43
Target_name	Start	End	Length	Cov(%)
sp\|F4NCI4_BETVU	931	1366	1369	31.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10202.1	1	429	470	66.8	429	74	0
Target_name	Start	End	Length	Cov(%)
AT4G36400.1	127	529	559	72.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1444	Augustus	mRNA	42459	54826	.	-	.	ID=Dca10202.1;Parent=Dca10202
scaffold1444	Augustus	exon	42459	42584	.	-	.	ID=Dca10202.1.exon1;Parent=Dca10202.1
scaffold1444	Augustus	exon	43290	43415	.	-	.	ID=Dca10202.1.exon2;Parent=Dca10202.1
scaffold1444	Augustus	exon	43496	43581	.	-	.	ID=Dca10202.1.exon3;Parent=Dca10202.1
scaffold1444	Augustus	exon	43840	43945	.	-	.	ID=Dca10202.1.exon4;Parent=Dca10202.1
scaffold1444	Augustus	exon	44099	44173	.	-	.	ID=Dca10202.1.exon5;Parent=Dca10202.1
scaffold1444	Augustus	exon	44496	44604	.	-	.	ID=Dca10202.1.exon6;Parent=Dca10202.1
scaffold1444	Augustus	exon	45024	45124	.	-	.	ID=Dca10202.1.exon7;Parent=Dca10202.1
scaffold1444	Augustus	exon	45441	45521	.	-	.	ID=Dca10202.1.exon8;Parent=Dca10202.1
scaffold1444	Augustus	exon	45793	45902	.	-	.	ID=Dca10202.1.exon9;Parent=Dca10202.1
scaffold1444	Augustus	exon	46003	46098	.	-	.	ID=Dca10202.1.exon10;Parent=Dca10202.1
scaffold1444	Augustus	exon	46655	46773	.	-	.	ID=Dca10202.1.exon11;Parent=Dca10202.1
scaffold1444	Augustus	exon	47388	47458	.	-	.	ID=Dca10202.1.exon12;Parent=Dca10202.1
scaffold1444	Augustus	exon	48415	48462	.	-	.	ID=Dca10202.1.exon13;Parent=Dca10202.1
scaffold1444	Augustus	exon	48936	49037	.	-	.	ID=Dca10202.1.exon14;Parent=Dca10202.1
scaffold1444	Augustus	exon	49213	49547	.	-	.	ID=Dca10202.1.exon15;Parent=Dca10202.1
scaffold1444	Augustus	exon	51976	52401	.	-	.	ID=Dca10202.1.exon16;Parent=Dca10202.1
scaffold1444	Augustus	exon	54001	54826	.	-	.	ID=Dca10202.1.exon17;Parent=Dca10202.1