Carnation DB

Dca10847.1

Annotation

5-exons
f-1
sp|B9H6Y2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_716437#unknown#0F0P0C
AT4G14600.1 | Symbols: | Target SNARE coiled-coil domain protein | chr4:8376562-8378078 FORWARD LENGTH=137
Repeat List (scaffold148)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10847.1	7	125	131	56.48	119	63	1e-40
Target_name	Start	End	Length	Cov(%)
sp\|B9H6Y2_POPTR	16	134	135	88.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca10847.1	5	125	131	57.25	121	62	2e-41
Target_name	Start	End	Length	Cov(%)
AT4G14600.1	16	136	137	88.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold148	Augustus	mRNA	184178	185958	.	-	.	ID=Dca10847.1;Parent=Dca10847
scaffold148	Augustus	exon	184178	184225	.	-	.	ID=Dca10847.1.exon1;Parent=Dca10847.1
scaffold148	Augustus	exon	184320	184448	.	-	.	ID=Dca10847.1.exon2;Parent=Dca10847.1
scaffold148	Augus-PASA	exon	184625	184681	.	-	.	ID=Dca10847.1.exon3;Parent=Dca10847.1
scaffold148	Augus-PASA	exon	185618	185741	.	-	.	ID=Dca10847.1.exon4;Parent=Dca10847.1
scaffold148	Augus-PASA	exon	185921	185958	.	-	.	ID=Dca10847.1.exon5;Parent=Dca10847.1