Dca11017.1
Annotation
- 4-exons
- f-1
- sp|B9GSC9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_552472#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- AT1G02790.1 | Symbols: PGA4 | polygalacturonase 4 | chr1:610681-612225 REVERSE LENGTH=422
- Repeat List (scaffold149)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11017.1 |
13 |
239 |
292 |
40.41 |
227 |
52 |
1e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GSC9_POPTR |
45 |
265 |
413 |
53.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11017.1 |
11 |
239 |
292 |
39.38 |
229 |
51 |
7e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G02790.1 |
49 |
267 |
422 |
51.89 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold149 |
Augustus |
mRNA |
86476 |
88826 |
. |
- |
. |
ID=Dca11017.1;Parent=Dca11017 |
| scaffold149 |
Augustus |
exon |
86476 |
86638 |
. |
- |
. |
ID=Dca11017.1.exon1;Parent=Dca11017.1 |
| scaffold149 |
Augustus |
exon |
87466 |
87755 |
. |
- |
. |
ID=Dca11017.1.exon2;Parent=Dca11017.1 |
| scaffold149 |
Augustus |
exon |
88219 |
88527 |
. |
- |
. |
ID=Dca11017.1.exon3;Parent=Dca11017.1 |
| scaffold149 |
Augustus |
exon |
88710 |
88826 |
. |
- |
. |
ID=Dca11017.1.exon4;Parent=Dca11017.1 |
