Carnation DB

Dca11022.1

Annotation

23-exons
f-1
sp|B9I9P5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_572668#GO:0003824;GO:0015969#1F1P0C
AT4G02260.1 | Symbols: RSH1, AT-RSH1, ATRSH1 | RELA/SPOT homolog 1 | chr4:985451-991178 FORWARD LENGTH=884
Repeat List (scaffold149)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11022.1	92	869	870	60.22	778	59	0
Target_name	Start	End	Length	Cov(%)
sp\|B9I9P5_POPTR	8	886	892	98.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11022.1	92	869	870	57.12	778	57	0
Target_name	Start	End	Length	Cov(%)
AT4G02260.1	8	877	884	98.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold149	Augustus	mRNA	124169	136070	.	+	.	ID=Dca11022.1;Parent=Dca11022
scaffold149	Augustus	exon	124169	124352	.	+	.	ID=Dca11022.1.exon1;Parent=Dca11022.1
scaffold149	Augustus	exon	126578	126670	.	+	.	ID=Dca11022.1.exon2;Parent=Dca11022.1
scaffold149	Augustus	exon	127565	127737	.	+	.	ID=Dca11022.1.exon3;Parent=Dca11022.1
scaffold149	Augustus	exon	128695	128868	.	+	.	ID=Dca11022.1.exon4;Parent=Dca11022.1
scaffold149	Augustus	exon	129275	129340	.	+	.	ID=Dca11022.1.exon5;Parent=Dca11022.1
scaffold149	Augustus	exon	129427	129519	.	+	.	ID=Dca11022.1.exon6;Parent=Dca11022.1
scaffold149	Augustus	exon	129598	129705	.	+	.	ID=Dca11022.1.exon7;Parent=Dca11022.1
scaffold149	Augustus	exon	129840	129935	.	+	.	ID=Dca11022.1.exon8;Parent=Dca11022.1
scaffold149	Augustus	exon	130052	130102	.	+	.	ID=Dca11022.1.exon9;Parent=Dca11022.1
scaffold149	Augustus	exon	130193	130264	.	+	.	ID=Dca11022.1.exon10;Parent=Dca11022.1
scaffold149	Augustus	exon	130532	130639	.	+	.	ID=Dca11022.1.exon11;Parent=Dca11022.1
scaffold149	Augustus	exon	132807	132869	.	+	.	ID=Dca11022.1.exon12;Parent=Dca11022.1
scaffold149	Augustus	exon	132963	133019	.	+	.	ID=Dca11022.1.exon13;Parent=Dca11022.1
scaffold149	Augustus	exon	133146	133247	.	+	.	ID=Dca11022.1.exon14;Parent=Dca11022.1
scaffold149	Augustus	exon	133537	133689	.	+	.	ID=Dca11022.1.exon15;Parent=Dca11022.1
scaffold149	Augustus	exon	133778	133909	.	+	.	ID=Dca11022.1.exon16;Parent=Dca11022.1
scaffold149	Augustus	exon	133996	134082	.	+	.	ID=Dca11022.1.exon17;Parent=Dca11022.1
scaffold149	Augustus	exon	134177	134248	.	+	.	ID=Dca11022.1.exon18;Parent=Dca11022.1
scaffold149	Augustus	exon	134351	134437	.	+	.	ID=Dca11022.1.exon19;Parent=Dca11022.1
scaffold149	Augustus	exon	134522	134945	.	+	.	ID=Dca11022.1.exon20;Parent=Dca11022.1
scaffold149	Augustus	exon	135429	135490	.	+	.	ID=Dca11022.1.exon21;Parent=Dca11022.1
scaffold149	Augustus	exon	135578	135646	.	+	.	ID=Dca11022.1.exon22;Parent=Dca11022.1
scaffold149	Augustus	exon	135984	136070	.	+	.	ID=Dca11022.1.exon23;Parent=Dca11022.1