Carnation DB

Dca1112.1

Annotation

7-exons
f-22
sp|D7MC24_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_915007#unknown#0F0P0C
Repeat List (scaffold10302)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1112.1	28	295	302	47.01	268	48	1e-60
Target_name	Start	End	Length	Cov(%)
sp\|D7MC24_ARALL	201	497	501	59.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1112.1	28	295	302	44.37	268	45	8e-55
Target_name	Start	End	Length	Cov(%)
AT4G17150.1	201	498	502	59.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10302	Augustus	mRNA	1244	5873	.	+	.	ID=Dca1112.1;Parent=Dca1112
scaffold10302	Augustus	exon	1244	1324	.	+	.	ID=Dca1112.1.exon1;Parent=Dca1112.1
scaffold10302	Augustus	exon	2493	2573	.	+	.	ID=Dca1112.1.exon2;Parent=Dca1112.1
scaffold10302	Augustus	exon	3333	3431	.	+	.	ID=Dca1112.1.exon3;Parent=Dca1112.1
scaffold10302	Augustus	exon	3525	3683	.	+	.	ID=Dca1112.1.exon4;Parent=Dca1112.1
scaffold10302	Augustus	exon	3907	4047	.	+	.	ID=Dca1112.1.exon5;Parent=Dca1112.1
scaffold10302	Augustus	exon	4931	5059	.	+	.	ID=Dca1112.1.exon6;Parent=Dca1112.1
scaffold10302	Augustus	exon	5655	5873	.	+	.	ID=Dca1112.1.exon7;Parent=Dca1112.1