Carnation DB

Dca11197.1

Annotation

6-exons
f-1
sp|B9SZP8_RICCO#Protein-tyrosine phosphatase mitochondrial 1, mitochondrial, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0006390#GO:0004725;GO:0008138#2F0P0C
Repeat List (scaffold15)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11197.1	43	350	350	56.85	308	65	1e-113
Target_name	Start	End	Length	Cov(%)
sp\|B9SZP8_RICCO	26	333	333	92.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11197.1	1	350	350	54	350	53	3e-97
Target_name	Start	End	Length	Cov(%)
AT2G35680.1	1	337	337	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15	Augus-PASA	mRNA	150274	152977	.	+	.	ID=Dca11197.1;Parent=Dca11197
scaffold15	Augus-PASA	exon	150274	150549	.	+	.	ID=Dca11197.1.exon1;Parent=Dca11197.1
scaffold15	Augus-PASA	exon	151038	151160	.	+	.	ID=Dca11197.1.exon2;Parent=Dca11197.1
scaffold15	Augus-PASA	exon	151867	151960	.	+	.	ID=Dca11197.1.exon3;Parent=Dca11197.1
scaffold15	Augus-PASA	exon	152139	152221	.	+	.	ID=Dca11197.1.exon4;Parent=Dca11197.1
scaffold15	Augus-PASA	exon	152318	152407	.	+	.	ID=Dca11197.1.exon5;Parent=Dca11197.1
scaffold15	Augus-PASA	exon	152591	152977	.	+	.	ID=Dca11197.1.exon6;Parent=Dca11197.1