Carnation DB

Dca11277.1

Annotation

8-exons
f-1
sp|B9GYT1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830906#unknown#0F0P0C
sp|B9RG43_RICCO#U2 small nuclear ribonucleoprotein A, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1439000#GO:0030529;GO:0003676#1F0P1C
Repeat List (scaffold1500)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11277.1	1	285	289	74.74	285	75	3e-114
Target_name	Start	End	Length	Cov(%)
sp\|B9GYT1_POPTR	1	284	284	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11277.1	1	239	289	67.12	239	82	2e-107
Target_name	Start	End	Length	Cov(%)
AT1G09760.1	1	238	249	95.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1500	Augus-PASA	mRNA	19291	23722	.	+	.	ID=Dca11277.1;Parent=Dca11277
scaffold1500	Augus-PASA	exon	19291	19372	.	+	.	ID=Dca11277.1.exon1;Parent=Dca11277.1
scaffold1500	Augus-PASA	exon	19488	19528	.	+	.	ID=Dca11277.1.exon2;Parent=Dca11277.1
scaffold1500	Augus-PASA	exon	19826	19955	.	+	.	ID=Dca11277.1.exon3;Parent=Dca11277.1
scaffold1500	Augus-PASA	exon	20061	20266	.	+	.	ID=Dca11277.1.exon4;Parent=Dca11277.1
scaffold1500	Augus-PASA	exon	22064	22225	.	+	.	ID=Dca11277.1.exon5;Parent=Dca11277.1
scaffold1500	Augus-PASA	exon	23129	23179	.	+	.	ID=Dca11277.1.exon6;Parent=Dca11277.1
scaffold1500	Augus-PASA	exon	23359	23538	.	+	.	ID=Dca11277.1.exon7;Parent=Dca11277.1
scaffold1500	Augus-PASA	exon	23705	23722	.	+	.	ID=Dca11277.1.exon8;Parent=Dca11277.1