Dca11450.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold1510)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11450.1 |
1 |
624 |
695 |
41.72 |
624 |
41 |
6e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
84 |
750 |
1717 |
38.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca11450.1 |
446 |
556 |
695 |
5.75 |
111 |
33 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
67 |
188 |
192 |
63.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1510 |
Augustus |
mRNA |
8169 |
10565 |
. |
+ |
. |
ID=Dca11450.1;Parent=Dca11450 |
| scaffold1510 |
Augustus |
exon |
8169 |
9837 |
. |
+ |
. |
ID=Dca11450.1.exon1;Parent=Dca11450.1 |
| scaffold1510 |
Augustus |
exon |
9965 |
10018 |
. |
+ |
. |
ID=Dca11450.1.exon2;Parent=Dca11450.1 |
| scaffold1510 |
Augustus |
exon |
10201 |
10565 |
. |
+ |
. |
ID=Dca11450.1.exon3;Parent=Dca11450.1 |
