Carnation DB

Dca1180.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
AT4G23180.1 | Symbols: CRK10, RLK4 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | chr4:12138171-12140780 FORWARD LENGTH=669
Repeat List (scaffold1033)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1180.1	3	679	1081	26.73	677	43	3e-162
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	347	1023	1114	60.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1180.1	777	1047	1081	14.61	271	59	8e-97
Target_name	Start	End	Length	Cov(%)
AT4G23180.1	365	635	669	40.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1033	Augustus	mRNA	69552	73470	.	-	.	ID=Dca1180.1;Parent=Dca1180
scaffold1033	Augustus	exon	69552	69869	.	-	.	ID=Dca1180.1.exon1;Parent=Dca1180.1
scaffold1033	Augustus	exon	70189	70339	.	-	.	ID=Dca1180.1.exon2;Parent=Dca1180.1
scaffold1033	Augustus	exon	70451	70688	.	-	.	ID=Dca1180.1.exon3;Parent=Dca1180.1
scaffold1033	Augustus	exon	70777	70987	.	-	.	ID=Dca1180.1.exon4;Parent=Dca1180.1
scaffold1033	Augustus	exon	71143	73470	.	-	.	ID=Dca1180.1.exon5;Parent=Dca1180.1
scaffold1033	Augustus	mRNA	69552	74283	.	-	.	ID=Dca1180.2;Parent=Dca1180
scaffold1033	Augustus	exon	69552	69869	.	-	.	ID=Dca1180.2.exon1;Parent=Dca1180.2
scaffold1033	Augustus	exon	70189	70339	.	-	.	ID=Dca1180.2.exon2;Parent=Dca1180.2
scaffold1033	Augustus	exon	70451	70688	.	-	.	ID=Dca1180.2.exon3;Parent=Dca1180.2
scaffold1033	Augustus	exon	70777	70987	.	-	.	ID=Dca1180.2.exon4;Parent=Dca1180.2
scaffold1033	Augustus	exon	71143	73412	.	-	.	ID=Dca1180.2.exon5;Parent=Dca1180.2
scaffold1033	Augustus	exon	73506	74283	.	-	.	ID=Dca1180.2.exon6;Parent=Dca1180.2