Carnation DB

Dca11860.1

Annotation

6-exons
f-1
sp|A5C7G8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012100#GO:0005634;GO:0003677;GO:0006355#1F1P1C
AT5G17300.1 | Symbols: RVE1 | Homeodomain-like superfamily protein | chr5:5690435-5692435 REVERSE LENGTH=387
Repeat List (scaffold1533)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11860.1	5	410	410	51.21	406	43	9e-79
Target_name	Start	End	Length	Cov(%)
sp\|A5C7G8_VITVI	53	543	543	90.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11860.1	38	384	410	37.31	347	42	2e-49
Target_name	Start	End	Length	Cov(%)
AT5G17300.1	43	371	387	85.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1533	Augus-PASA	mRNA	34464	36733	.	+	.	ID=Dca11860.1;Parent=Dca11860
scaffold1533	Augus-PASA	exon	34464	34475	.	+	.	ID=Dca11860.1.exon1;Parent=Dca11860.1
scaffold1533	Augus-PASA	exon	35077	35181	.	+	.	ID=Dca11860.1.exon2;Parent=Dca11860.1
scaffold1533	Augus-PASA	exon	35295	35406	.	+	.	ID=Dca11860.1.exon3;Parent=Dca11860.1
scaffold1533	Augus-PASA	exon	35503	35564	.	+	.	ID=Dca11860.1.exon4;Parent=Dca11860.1
scaffold1533	Augustus	exon	35705	36079	.	+	.	ID=Dca11860.1.exon5;Parent=Dca11860.1
scaffold1533	Augustus	exon	36167	36733	.	+	.	ID=Dca11860.1.exon6;Parent=Dca11860.1