Carnation DB

Dca11863.1

Annotation

6-exons
f-1
sp|A1KYX8_SALEU#Phytoene synthase#Salicornia europaea (Common glasswort)#Name=PSY#GO:0016765;GO:0009058#1F1P0C
Repeat List (scaffold1533)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11863.1	1	419	419	76.84	419	77	0
Target_name	Start	End	Length	Cov(%)
sp\|A1KYX8_SALEU	1	417	419	99.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca11863.1	2	415	419	70.88	414	69	7e-169
Target_name	Start	End	Length	Cov(%)
AT5G17230.3	4	433	437	98.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1533	Augustus	mRNA	51196	54050	.	+	.	ID=Dca11863.1;Parent=Dca11863
scaffold1533	Augustus	exon	51196	51631	.	+	.	ID=Dca11863.1.exon1;Parent=Dca11863.1
scaffold1533	Augustus	exon	51738	51788	.	+	.	ID=Dca11863.1.exon2;Parent=Dca11863.1
scaffold1533	Augustus	exon	52217	52389	.	+	.	ID=Dca11863.1.exon3;Parent=Dca11863.1
scaffold1533	Augustus	exon	52661	52896	.	+	.	ID=Dca11863.1.exon4;Parent=Dca11863.1
scaffold1533	Augustus	exon	53497	53689	.	+	.	ID=Dca11863.1.exon5;Parent=Dca11863.1
scaffold1533	Augustus	exon	53880	54050	.	+	.	ID=Dca11863.1.exon6;Parent=Dca11863.1