Dca12003.1
Annotation
- 2-exons
- f-1
- sp|B9SNB3_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0174470#GO:0043531;GO:0006952#1F1P0C
- sp|B9IBB8_POPTR#Cc-nbs-lrr resistance protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_571956#GO:0043531;GO:0006952#1F1P0C
- Repeat List (scaffold1542)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12003.1 |
1 |
289 |
298 |
34.22 |
289 |
31 |
1e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SNB3_RICCO |
1 |
322 |
1782 |
18.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12003.1 |
206 |
296 |
298 |
12.08 |
91 |
40 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0693100-01 |
292 |
381 |
521 |
17.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1542 |
Augustus |
mRNA |
60805 |
62529 |
. |
+ |
. |
ID=Dca12003.1;Parent=Dca12003 |
| scaffold1542 |
Augustus |
exon |
60805 |
61429 |
. |
+ |
. |
ID=Dca12003.1.exon1;Parent=Dca12003.1 |
| scaffold1542 |
Augustus |
exon |
62258 |
62529 |
. |
+ |
. |
ID=Dca12003.1.exon2;Parent=Dca12003.1 |
