Dca12082.1
Annotation
- 4-exons
- f-1
- sp|Q9LMV1_ARATH#F5M15.26#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1548)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12082.1 |
373 |
449 |
586 |
5.63 |
77 |
43 |
4e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LMV1_ARATH |
1079 |
1155 |
1838 |
4.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12082.1 |
185 |
376 |
586 |
11.26 |
192 |
35 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
7 |
197 |
591 |
32.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1548 |
Augustus |
mRNA |
3917 |
8612 |
. |
+ |
. |
ID=Dca12082.1;Parent=Dca12082 |
| scaffold1548 |
Augustus |
exon |
3917 |
4313 |
. |
+ |
. |
ID=Dca12082.1.exon1;Parent=Dca12082.1 |
| scaffold1548 |
Augustus |
exon |
4386 |
5121 |
. |
+ |
. |
ID=Dca12082.1.exon2;Parent=Dca12082.1 |
| scaffold1548 |
Augustus |
exon |
5362 |
5557 |
. |
+ |
. |
ID=Dca12082.1.exon3;Parent=Dca12082.1 |
| scaffold1548 |
Augustus |
exon |
8181 |
8612 |
. |
+ |
. |
ID=Dca12082.1.exon4;Parent=Dca12082.1 |
