Carnation DB

Dca12239.1

Annotation

18-exons
f-1
sp|B9SHH5_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1121820#GO:0005634;GO:0006355#0F1P1C
AT5G18230.2 | Symbols: | transcription regulator NOT2/NOT3/NOT5 family protein | chr5:6021610-6027031 REVERSE LENGTH=845
Repeat List (scaffold1558)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12239.1	1	822	822	67.88	822	62	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SHH5_RICCO	1	889	889	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12239.1	1	822	822	59.73	822	55	0
Target_name	Start	End	Length	Cov(%)
AT5G18230.2	1	845	845	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1558	Augustus	mRNA	28935	40147	.	-	.	ID=Dca12239.1;Parent=Dca12239
scaffold1558	Augustus	exon	28935	29001	.	-	.	ID=Dca12239.1.exon1;Parent=Dca12239.1
scaffold1558	Augustus	exon	29469	29566	.	-	.	ID=Dca12239.1.exon2;Parent=Dca12239.1
scaffold1558	Augustus	exon	29758	29892	.	-	.	ID=Dca12239.1.exon3;Parent=Dca12239.1
scaffold1558	Augustus	exon	29980	30258	.	-	.	ID=Dca12239.1.exon4;Parent=Dca12239.1
scaffold1558	Augustus	exon	31012	31139	.	-	.	ID=Dca12239.1.exon5;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	31262	31388	.	-	.	ID=Dca12239.1.exon6;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	31664	31837	.	-	.	ID=Dca12239.1.exon7;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	32459	32541	.	-	.	ID=Dca12239.1.exon8;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	32649	33177	.	-	.	ID=Dca12239.1.exon9;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	34015	34086	.	-	.	ID=Dca12239.1.exon10;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	35118	35132	.	-	.	ID=Dca12239.1.exon11;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	35347	35457	.	-	.	ID=Dca12239.1.exon12;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	35826	35972	.	-	.	ID=Dca12239.1.exon13;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	36064	36153	.	-	.	ID=Dca12239.1.exon14;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	36480	36530	.	-	.	ID=Dca12239.1.exon15;Parent=Dca12239.1
scaffold1558	Augus-PASA	exon	37597	37734	.	-	.	ID=Dca12239.1.exon16;Parent=Dca12239.1
scaffold1558	Augustus	exon	39717	39848	.	-	.	ID=Dca12239.1.exon17;Parent=Dca12239.1
scaffold1558	Augustus	exon	40055	40147	.	-	.	ID=Dca12239.1.exon18;Parent=Dca12239.1