Dca12386.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold15656)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12386.1 |
570 |
1055 |
1055 |
23.6 |
486 |
51 |
2e-145
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
241 |
716 |
1313 |
36.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12386.1 |
683 |
1055 |
1055 |
12.03 |
373 |
32 |
4e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
289 |
686 |
1428 |
27.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15656 |
Augustus |
mRNA |
9846 |
16763 |
. |
+ |
. |
ID=Dca12386.1;Parent=Dca12386 |
| scaffold15656 |
Augustus |
exon |
9846 |
9923 |
. |
+ |
. |
ID=Dca12386.1.exon1;Parent=Dca12386.1 |
| scaffold15656 |
Augustus |
exon |
9991 |
11611 |
. |
+ |
. |
ID=Dca12386.1.exon2;Parent=Dca12386.1 |
| scaffold15656 |
Augustus |
exon |
15296 |
16763 |
. |
+ |
. |
ID=Dca12386.1.exon3;Parent=Dca12386.1 |
