Dca12547.1
Annotation
- 3-exons
- f-1
- sp|B9MX83_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_796626#GO:0008026;GO:0006310#1F1P0C
- Repeat List (scaffold1576)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12547.1 |
115 |
275 |
290 |
20.68 |
161 |
34 |
2e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MX83_POPTR |
219 |
391 |
391 |
44.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12547.1 |
133 |
256 |
290 |
14.48 |
124 |
34 |
2e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G35733.1 |
232 |
344 |
358 |
31.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1576 |
Augustus |
mRNA |
37221 |
39808 |
. |
+ |
. |
ID=Dca12547.1;Parent=Dca12547 |
| scaffold1576 |
Augustus |
exon |
37221 |
37617 |
. |
+ |
. |
ID=Dca12547.1.exon1;Parent=Dca12547.1 |
| scaffold1576 |
Augustus |
exon |
37982 |
38007 |
. |
+ |
. |
ID=Dca12547.1.exon2;Parent=Dca12547.1 |
| scaffold1576 |
Augustus |
exon |
39359 |
39808 |
. |
+ |
. |
ID=Dca12547.1.exon3;Parent=Dca12547.1 |
