Dca12571.1
Annotation
- 3-exons
- f-1
- sp|A5BU71_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_034582#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold15777)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12571.1 |
13 |
551 |
553 |
39.96 |
539 |
39 |
4e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BU71_VITVI |
470 |
1006 |
1881 |
28.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12571.1 |
392 |
553 |
553 |
10.3 |
162 |
35 |
1e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
213 |
370 |
707 |
22.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15777 |
Augustus |
mRNA |
2117 |
4180 |
. |
- |
. |
ID=Dca12571.1;Parent=Dca12571 |
| scaffold15777 |
Augustus |
exon |
2117 |
2704 |
. |
- |
. |
ID=Dca12571.1.exon1;Parent=Dca12571.1 |
| scaffold15777 |
Augustus |
exon |
3009 |
3689 |
. |
- |
. |
ID=Dca12571.1.exon2;Parent=Dca12571.1 |
| scaffold15777 |
Augustus |
exon |
3788 |
4180 |
. |
- |
. |
ID=Dca12571.1.exon3;Parent=Dca12571.1 |
