Dca12639.1
Annotation
- 4-exons
- f-1
- sp|B9IQP7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_574344#unknown#0F0P0C
- Repeat List (scaffold158)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12639.1 |
99 |
448 |
453 |
48.78 |
350 |
64 |
1e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IQP7_POPTR |
31 |
375 |
381 |
90.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12639.1 |
107 |
435 |
453 |
36.2 |
329 |
48 |
3e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0614300-01 |
127 |
464 |
480 |
70.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold158 |
Augustus |
mRNA |
283969 |
285755 |
. |
+ |
. |
ID=Dca12639.1;Parent=Dca12639 |
| scaffold158 |
Augustus |
exon |
283969 |
284465 |
. |
+ |
. |
ID=Dca12639.1.exon1;Parent=Dca12639.1 |
| scaffold158 |
Augustus |
exon |
284574 |
284748 |
. |
+ |
. |
ID=Dca12639.1.exon2;Parent=Dca12639.1 |
| scaffold158 |
Augustus |
exon |
284844 |
285028 |
. |
+ |
. |
ID=Dca12639.1.exon3;Parent=Dca12639.1 |
| scaffold158 |
Augus-PASA |
exon |
285251 |
285755 |
. |
+ |
. |
ID=Dca12639.1.exon4;Parent=Dca12639.1 |
