Carnation DB

Dca12784.1

Annotation

7-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
sp|G5DWE3_SILLA#Cullin-associated NEDD8-dissociated protein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0005488#1F0P0C
Repeat List (scaffold1589)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12784.1	21	404	566	21.55	384	32	5e-48
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	110	490	1114	34.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12784.1	420	515	566	13.78	96	82	1e-41
Target_name	Start	End	Length	Cov(%)
AT2G02560.1	482	577	1219	7.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1589	Augustus	mRNA	51635	56384	.	-	.	ID=Dca12784.1;Parent=Dca12784
scaffold1589	Augustus	exon	51635	51697	.	-	.	ID=Dca12784.1.exon1;Parent=Dca12784.1
scaffold1589	Augustus	exon	51980	52072	.	-	.	ID=Dca12784.1.exon2;Parent=Dca12784.1
scaffold1589	Augustus	exon	53027	53113	.	-	.	ID=Dca12784.1.exon3;Parent=Dca12784.1
scaffold1589	Augustus	exon	53203	53313	.	-	.	ID=Dca12784.1.exon4;Parent=Dca12784.1
scaffold1589	Augustus	exon	53440	53547	.	-	.	ID=Dca12784.1.exon5;Parent=Dca12784.1
scaffold1589	Augustus	exon	53946	54023	.	-	.	ID=Dca12784.1.exon6;Parent=Dca12784.1
scaffold1589	Augustus	exon	55224	56384	.	-	.	ID=Dca12784.1.exon7;Parent=Dca12784.1