Carnation DB

Dca12805.1

Annotation

6-exons
f-1
sp|F6HYI3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0037g00040#unknown#0F0P0C
sp|D0PX88_LOTJA#Roothairless1/slippery#Lotus japonicus#unknown#unknown#0F0P0C
Repeat List (scaffold159)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12805.1	69	285	299	53.17	217	57	8e-71
Target_name	Start	End	Length	Cov(%)
sp\|F6HYI3_VITVI	205	484	504	55.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12805.1	22	289	299	51.17	268	49	1e-67
Target_name	Start	End	Length	Cov(%)
AT2G24260.1	21	320	350	85.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold159	Augus-PASA	mRNA	123466	127279	.	+	.	ID=Dca12805.1;Parent=Dca12805
scaffold159	Augus-PASA	exon	123466	123678	.	+	.	ID=Dca12805.1.exon1;Parent=Dca12805.1
scaffold159	Augus-PASA	exon	124797	124988	.	+	.	ID=Dca12805.1.exon2;Parent=Dca12805.1
scaffold159	Augus-PASA	exon	125073	125138	.	+	.	ID=Dca12805.1.exon3;Parent=Dca12805.1
scaffold159	Augus-PASA	exon	125765	125830	.	+	.	ID=Dca12805.1.exon4;Parent=Dca12805.1
scaffold159	Augus-PASA	exon	125959	126027	.	+	.	ID=Dca12805.1.exon5;Parent=Dca12805.1
scaffold159	Augus-PASA	exon	126986	127279	.	+	.	ID=Dca12805.1.exon6;Parent=Dca12805.1