Dca13163.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold16088)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13163.1 |
392 |
581 |
597 |
18.09 |
190 |
49 |
3e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1268 |
1490 |
1501 |
14.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13163.1 |
396 |
580 |
597 |
12.89 |
185 |
36 |
2e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
9 |
226 |
230 |
94.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16088 |
Augustus |
mRNA |
24 |
4224 |
. |
+ |
. |
ID=Dca13163.1;Parent=Dca13163 |
| scaffold16088 |
Augustus |
exon |
24 |
1190 |
. |
+ |
. |
ID=Dca13163.1.exon1;Parent=Dca13163.1 |
| scaffold16088 |
Augustus |
exon |
3500 |
3768 |
. |
+ |
. |
ID=Dca13163.1.exon2;Parent=Dca13163.1 |
| scaffold16088 |
Augustus |
exon |
3867 |
4224 |
. |
+ |
. |
ID=Dca13163.1.exon3;Parent=Dca13163.1 |
