Carnation DB

Dca13247.1

Annotation

12-exons
f-1
sp|B9MYB7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_594614#GO:0005634;GO:0005525;GO:0003924;GO:0042254#2F1P1C
AT1G06720.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2060615-2067281 REVERSE LENGTH=1147
Repeat List (scaffold1613)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13247.1	88	798	821	55.54	711	61	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MYB7_POPTR	9	730	1181	61.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13247.1	85	798	821	48.23	714	54	0
Target_name	Start	End	Length	Cov(%)
Os03t0333100-01	6	720	1181	60.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1613	Augustus	mRNA	24911	32232	.	-	.	ID=Dca13247.1;Parent=Dca13247
scaffold1613	Augustus	exon	24911	25324	.	-	.	ID=Dca13247.1.exon1;Parent=Dca13247.1
scaffold1613	Augustus	exon	25420	25616	.	-	.	ID=Dca13247.1.exon2;Parent=Dca13247.1
scaffold1613	Augustus	exon	25763	25907	.	-	.	ID=Dca13247.1.exon3;Parent=Dca13247.1
scaffold1613	Augustus	exon	26588	26916	.	-	.	ID=Dca13247.1.exon4;Parent=Dca13247.1
scaffold1613	Augustus	exon	27043	27280	.	-	.	ID=Dca13247.1.exon5;Parent=Dca13247.1
scaffold1613	Augustus	exon	27481	27691	.	-	.	ID=Dca13247.1.exon6;Parent=Dca13247.1
scaffold1613	Augustus	exon	27775	27965	.	-	.	ID=Dca13247.1.exon7;Parent=Dca13247.1
scaffold1613	Augustus	exon	28447	28565	.	-	.	ID=Dca13247.1.exon8;Parent=Dca13247.1
scaffold1613	Augustus	exon	28729	28819	.	-	.	ID=Dca13247.1.exon9;Parent=Dca13247.1
scaffold1613	Augustus	exon	28920	29066	.	-	.	ID=Dca13247.1.exon10;Parent=Dca13247.1
scaffold1613	Augustus	exon	29529	29710	.	-	.	ID=Dca13247.1.exon11;Parent=Dca13247.1
scaffold1613	Augustus	exon	32031	32232	.	-	.	ID=Dca13247.1.exon12;Parent=Dca13247.1