Carnation DB

Dca13419.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Repeat List (scaffold1624)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13419.1	592	934	934	30.19	343	82	3e-173
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	826	1169	1717	20.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13419.1	475	587	934	4.06	113	34	4e-09
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	237	330	707	13.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1624	Augustus	mRNA	32543	36371	.	-	.	ID=Dca13419.1;Parent=Dca13419
scaffold1624	Augustus	exon	32543	33578	.	-	.	ID=Dca13419.1.exon1;Parent=Dca13419.1
scaffold1624	Augustus	exon	33666	34125	.	-	.	ID=Dca13419.1.exon2;Parent=Dca13419.1
scaffold1624	Augustus	exon	34205	35388	.	-	.	ID=Dca13419.1.exon3;Parent=Dca13419.1
scaffold1624	Augustus	exon	35496	35572	.	-	.	ID=Dca13419.1.exon4;Parent=Dca13419.1
scaffold1624	Augustus	exon	36324	36371	.	-	.	ID=Dca13419.1.exon5;Parent=Dca13419.1