Carnation DB

Dca13457.1

Annotation

5-exons
f-1576
sp|B2BXI1_ARALL#Gag-pol polymerase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=GagPol2#unknown#0F0P0C
Repeat List (scaffold16260)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13457.1	2	121	366	15.3	120	47	3e-28
Target_name	Start	End	Length	Cov(%)
sp\|B2BXI1_ARALL	544	663	672	17.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13457.1	4	117	366	10.38	114	33	7e-11
Target_name	Start	End	Length	Cov(%)
Os03t0439900-01	195	312	421	28.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16260	Augustus	mRNA	353	4056	.	+	.	ID=Dca13457.1;Parent=Dca13457
scaffold16260	Augustus	exon	353	1014	.	+	.	ID=Dca13457.1.exon1;Parent=Dca13457.1
scaffold16260	Augustus	exon	1096	2399	.	+	.	ID=Dca13457.1.exon2;Parent=Dca13457.1
scaffold16260	Augustus	exon	3154	3468	.	+	.	ID=Dca13457.1.exon3;Parent=Dca13457.1
scaffold16260	Augustus	exon	3571	3761	.	+	.	ID=Dca13457.1.exon4;Parent=Dca13457.1
scaffold16260	Augustus	exon	3853	4056	.	+	.	ID=Dca13457.1.exon5;Parent=Dca13457.1