Dca13539.1
Annotation
- 3-exons
- f-1
- sp|Q2QP23_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class, expressed#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g35940#unknown#0F0P0C
- Repeat List (scaffold163)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13539.1 |
3 |
982 |
982 |
57.53 |
980 |
58 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QP23_ORYSJ |
129 |
1108 |
1114 |
87.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13539.1 |
2 |
663 |
982 |
30.44 |
662 |
45 |
6e-169
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0208400-02 |
133 |
792 |
829 |
79.61 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold163 |
Augustus |
mRNA |
258285 |
261387 |
. |
- |
. |
ID=Dca13539.1;Parent=Dca13539 |
| scaffold163 |
Augustus |
exon |
258285 |
258944 |
. |
- |
. |
ID=Dca13539.1.exon1;Parent=Dca13539.1 |
| scaffold163 |
Augustus |
exon |
259026 |
259131 |
. |
- |
. |
ID=Dca13539.1.exon2;Parent=Dca13539.1 |
| scaffold163 |
Augustus |
exon |
259205 |
261387 |
. |
- |
. |
ID=Dca13539.1.exon3;Parent=Dca13539.1 |
