Carnation DB

Dca1389.1

Annotation

6-exons
f-103
sp|B9SDL8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0422030#unknown#0F0P0C
Os11t0568700-02 START-like domain domain containing protein.
Repeat List (scaffold104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1389.1	1	292	423	33.56	292	46	4e-58
Target_name	Start	End	Length	Cov(%)
sp\|B9SDL8_RICCO	237	542	707	43.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1389.1	1	134	423	20.56	134	65	1e-50
Target_name	Start	End	Length	Cov(%)
Os11t0568700-02	180	313	550	24.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold104	Augustus	mRNA	223090	225942	.	+	.	ID=Dca1389.1;Parent=Dca1389
scaffold104	Augustus	exon	223090	223168	.	+	.	ID=Dca1389.1.exon1;Parent=Dca1389.1
scaffold104	Augustus	exon	223814	223917	.	+	.	ID=Dca1389.1.exon2;Parent=Dca1389.1
scaffold104	Augustus	exon	224011	224150	.	+	.	ID=Dca1389.1.exon3;Parent=Dca1389.1
scaffold104	Augustus	exon	224408	224510	.	+	.	ID=Dca1389.1.exon4;Parent=Dca1389.1
scaffold104	Augustus	exon	224856	225556	.	+	.	ID=Dca1389.1.exon5;Parent=Dca1389.1
scaffold104	Augustus	exon	225696	225942	.	+	.	ID=Dca1389.1.exon6;Parent=Dca1389.1