Carnation DB

Dca14193.1

Annotation

11-exons
f-1
sp|F6H2R1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0125g00250#GO:0000166;GO:0008270#2F0P0C
sp|B9SWT2_RICCO#Brca1-associated protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0010990#GO:0000166;GO:0008270#2F0P0C
Repeat List (scaffold167)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14193.1	13	460	476	67.01	448	70	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H2R1_VITVI	37	489	497	91.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14193.1	1	450	476	59.45	450	63	4e-166
Target_name	Start	End	Length	Cov(%)
AT2G26000.2	1	451	479	94.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold167	Augus-PASA	mRNA	22959	25755	.	+	.	ID=Dca14193.1;Parent=Dca14193
scaffold167	Augus-PASA	exon	22959	23114	.	+	.	ID=Dca14193.1.exon1;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	23244	23471	.	+	.	ID=Dca14193.1.exon2;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	23570	23684	.	+	.	ID=Dca14193.1.exon3;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	23783	23880	.	+	.	ID=Dca14193.1.exon4;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	24255	24361	.	+	.	ID=Dca14193.1.exon5;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	24488	24737	.	+	.	ID=Dca14193.1.exon6;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	24826	24879	.	+	.	ID=Dca14193.1.exon7;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	25007	25150	.	+	.	ID=Dca14193.1.exon8;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	25242	25306	.	+	.	ID=Dca14193.1.exon9;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	25431	25485	.	+	.	ID=Dca14193.1.exon10;Parent=Dca14193.1
scaffold167	Augus-PASA	exon	25597	25755	.	+	.	ID=Dca14193.1.exon11;Parent=Dca14193.1