Carnation DB

Dca1439.1

Annotation

8-exons
f-1
sp|E0CPU3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g10390#unknown#0F0P0C
AT3G49180.1 | Symbols: RID3 | Transducin/WD40 repeat-like superfamily protein | chr3:18229810-18231874 FORWARD LENGTH=438
Repeat List (scaffold1042)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1439.1	2	429	435	58.16	428	58	6e-148
Target_name	Start	End	Length	Cov(%)
sp\|E0CPU3_VITVI	5	440	448	97.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1439.1	1	426	435	48.96	426	49	4e-119
Target_name	Start	End	Length	Cov(%)
AT3G49180.1	1	431	438	98.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1042	Augustus	mRNA	8313	16748	.	+	.	ID=Dca1439.1;Parent=Dca1439
scaffold1042	Augustus	exon	8313	8504	.	+	.	ID=Dca1439.1.exon1;Parent=Dca1439.1
scaffold1042	Augustus	exon	9101	9214	.	+	.	ID=Dca1439.1.exon2;Parent=Dca1439.1
scaffold1042	Augustus	exon	9327	9460	.	+	.	ID=Dca1439.1.exon3;Parent=Dca1439.1
scaffold1042	Augustus	exon	9589	9736	.	+	.	ID=Dca1439.1.exon4;Parent=Dca1439.1
scaffold1042	Augustus	exon	11537	11736	.	+	.	ID=Dca1439.1.exon5;Parent=Dca1439.1
scaffold1042	Augustus	exon	13008	13135	.	+	.	ID=Dca1439.1.exon6;Parent=Dca1439.1
scaffold1042	Augustus	exon	13681	13913	.	+	.	ID=Dca1439.1.exon7;Parent=Dca1439.1
scaffold1042	Augustus	exon	16590	16748	.	+	.	ID=Dca1439.1.exon8;Parent=Dca1439.1