Carnation DB

Dca14657.1

Annotation

8-exons
f-1
sp|B9IKJ0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_912668#GO:0003723;GO:0006396#1F1P0C
AT3G46210.1 | Symbols: | Ribosomal protein S5 domain 2-like superfamily protein | chr3:16976960-16978489 REVERSE LENGTH=239
Repeat List (scaffold17)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14657.1	1	237	242	74.79	237	77	3e-106
Target_name	Start	End	Length	Cov(%)
sp\|B9IKJ0_POPTR	1	238	243	97.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14657.1	1	231	242	70.66	231	74	5e-102
Target_name	Start	End	Length	Cov(%)
AT3G46210.1	1	232	239	97.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold17	Augus-PASA	mRNA	301658	304962	.	-	.	ID=Dca14657.1;Parent=Dca14657
scaffold17	Augus-PASA	exon	301658	301773	.	-	.	ID=Dca14657.1.exon1;Parent=Dca14657.1
scaffold17	Augus-PASA	exon	301958	302087	.	-	.	ID=Dca14657.1.exon2;Parent=Dca14657.1
scaffold17	Augus-PASA	exon	302427	302494	.	-	.	ID=Dca14657.1.exon3;Parent=Dca14657.1
scaffold17	Augus-PASA	exon	302755	302827	.	-	.	ID=Dca14657.1.exon4;Parent=Dca14657.1
scaffold17	Augus-PASA	exon	303083	303103	.	-	.	ID=Dca14657.1.exon5;Parent=Dca14657.1
scaffold17	Augus-PASA	exon	303907	304007	.	-	.	ID=Dca14657.1.exon6;Parent=Dca14657.1
scaffold17	Augus-PASA	exon	304287	304400	.	-	.	ID=Dca14657.1.exon7;Parent=Dca14657.1
scaffold17	Augus-PASA	exon	304857	304962	.	-	.	ID=Dca14657.1.exon8;Parent=Dca14657.1