Carnation DB

Dca15110.1

Annotation

9-exons
f-1
sp|E0CTV1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g01740#GO:0009055;GO:0031072;GO:0005506;GO:0051536;GO:0051082;GO:0006457#5F1P0C
AT2G42750.1 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:17793404-17795419 FORWARD LENGTH=344
Repeat List (scaffold1725)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15110.1	1	348	349	69.62	348	70	1e-130
Target_name	Start	End	Length	Cov(%)
sp\|E0CTV1_VITVI	1	328	331	99.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15110.1	1	342	349	64.46	342	64	6e-124
Target_name	Start	End	Length	Cov(%)
AT2G42750.1	1	338	344	98.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1725	Augus-PASA	mRNA	20606	22888	.	+	.	ID=Dca15110.1;Parent=Dca15110
scaffold1725	Augus-PASA	exon	20606	20869	.	+	.	ID=Dca15110.1.exon1;Parent=Dca15110.1
scaffold1725	Augus-PASA	exon	21140	21268	.	+	.	ID=Dca15110.1.exon2;Parent=Dca15110.1
scaffold1725	Augus-PASA	exon	21369	21498	.	+	.	ID=Dca15110.1.exon3;Parent=Dca15110.1
scaffold1725	Augus-PASA	exon	21588	21708	.	+	.	ID=Dca15110.1.exon4;Parent=Dca15110.1
scaffold1725	Augus-PASA	exon	22024	22105	.	+	.	ID=Dca15110.1.exon5;Parent=Dca15110.1
scaffold1725	Augus-PASA	exon	22213	22263	.	+	.	ID=Dca15110.1.exon6;Parent=Dca15110.1
scaffold1725	Augus-PASA	exon	22374	22412	.	+	.	ID=Dca15110.1.exon7;Parent=Dca15110.1
scaffold1725	Augus-PASA	exon	22540	22639	.	+	.	ID=Dca15110.1.exon8;Parent=Dca15110.1
scaffold1725	Augus-PASA	exon	22755	22888	.	+	.	ID=Dca15110.1.exon9;Parent=Dca15110.1