Carnation DB

Dca15162.1

Annotation

10-exons
f-1
sp|B9H3T2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_556179#GO:0016021;GO:0005524;GO:0004222;GO:0017111;GO:0008270#4F0P1C
sp|B9SIY9_RICCO#Cell division protease ftsH, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0596830#GO:0016021;GO:0005524;GO:0004222;GO:0008568;GO:0008270;GO:0051301;GO:0006508#4F2P1C
Repeat List (scaffold1728)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15162.1	413	498	499	13.02	86	75	3e-31
Target_name	Start	End	Length	Cov(%)
sp\|B9H3T2_POPTR	470	556	556	15.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15162.1	413	498	499	12.62	86	73	1e-29
Target_name	Start	End	Length	Cov(%)
AT3G02450.1	536	622	622	13.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1728	Augustus	mRNA	50437	53856	.	-	.	ID=Dca15162.1;Parent=Dca15162
scaffold1728	Augustus	exon	50437	50636	.	-	.	ID=Dca15162.1.exon1;Parent=Dca15162.1
scaffold1728	Augustus	exon	50788	50850	.	-	.	ID=Dca15162.1.exon2;Parent=Dca15162.1
scaffold1728	Augustus	exon	51234	51331	.	-	.	ID=Dca15162.1.exon3;Parent=Dca15162.1
scaffold1728	Augustus	exon	51517	51629	.	-	.	ID=Dca15162.1.exon4;Parent=Dca15162.1
scaffold1728	Augustus	exon	52316	52423	.	-	.	ID=Dca15162.1.exon5;Parent=Dca15162.1
scaffold1728	Augustus	exon	52532	52801	.	-	.	ID=Dca15162.1.exon6;Parent=Dca15162.1
scaffold1728	Augustus	exon	52886	53131	.	-	.	ID=Dca15162.1.exon7;Parent=Dca15162.1
scaffold1728	Augustus	exon	53241	53477	.	-	.	ID=Dca15162.1.exon8;Parent=Dca15162.1
scaffold1728	Augustus	exon	53598	53705	.	-	.	ID=Dca15162.1.exon9;Parent=Dca15162.1
scaffold1728	Augustus	exon	53800	53856	.	-	.	ID=Dca15162.1.exon10;Parent=Dca15162.1