Carnation DB

Dca1542.1

Annotation

5-exons
f-1
sp|B3TM15_ELAGV#Putative controlled tumor protein#Elaeis guineensis var tenera (Oil palm)#unknown#unknown#0F0P0C
Repeat List (scaffold10471)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1542.1	1	167	167	80.23	167	81	2e-74
Target_name	Start	End	Length	Cov(%)
sp\|B3TM15_ELAGV	1	167	167	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1542.1	1	167	167	74.25	167	74	4e-68
Target_name	Start	End	Length	Cov(%)
AT3G16640.1	1	168	168	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10471	Augus-PASA	mRNA	427	2071	.	+	.	ID=Dca1542.1;Parent=Dca1542
scaffold10471	Augus-PASA	exon	427	454	.	+	.	ID=Dca1542.1.exon1;Parent=Dca1542.1
scaffold10471	Augus-PASA	exon	1275	1348	.	+	.	ID=Dca1542.1.exon2;Parent=Dca1542.1
scaffold10471	Augus-PASA	exon	1460	1585	.	+	.	ID=Dca1542.1.exon3;Parent=Dca1542.1
scaffold10471	Augus-PASA	exon	1682	1839	.	+	.	ID=Dca1542.1.exon4;Parent=Dca1542.1
scaffold10471	Augus-PASA	exon	1954	2071	.	+	.	ID=Dca1542.1.exon5;Parent=Dca1542.1