Carnation DB

Dca15499.1

Annotation

9-exons
f-1
sp|B9N3R0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_744076#unknown#0F0P0C
AT4G22540.1 | Symbols: ORP2A | OSBP(oxysterol binding protein)-related protein 2A | chr4:11860969-11866108 REVERSE LENGTH=721
Repeat List (scaffold175)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15499.1	1	715	716	64.52	715	61	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N3R0_POPTR	6	735	737	99.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15499.1	1	710	716	60.75	710	58	0
Target_name	Start	End	Length	Cov(%)
AT4G22540.1	6	717	721	98.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold175	Augustus	mRNA	401721	409017	.	-	.	ID=Dca15499.1;Parent=Dca15499
scaffold175	Augustus	exon	401721	401897	.	-	.	ID=Dca15499.1.exon1;Parent=Dca15499.1
scaffold175	Augustus	exon	402186	402299	.	-	.	ID=Dca15499.1.exon2;Parent=Dca15499.1
scaffold175	Augustus	exon	402380	402610	.	-	.	ID=Dca15499.1.exon3;Parent=Dca15499.1
scaffold175	Augustus	exon	403351	403518	.	-	.	ID=Dca15499.1.exon4;Parent=Dca15499.1
scaffold175	Augustus	exon	403823	403978	.	-	.	ID=Dca15499.1.exon5;Parent=Dca15499.1
scaffold175	Augustus	exon	404243	404679	.	-	.	ID=Dca15499.1.exon6;Parent=Dca15499.1
scaffold175	Augustus	exon	405137	405230	.	-	.	ID=Dca15499.1.exon7;Parent=Dca15499.1
scaffold175	Augustus	exon	406371	406730	.	-	.	ID=Dca15499.1.exon8;Parent=Dca15499.1
scaffold175	Augustus	exon	408604	409017	.	-	.	ID=Dca15499.1.exon9;Parent=Dca15499.1