Carnation DB

Dca15541.1

Annotation

5-exons
f-1
sp|C6T7X8_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0008270#1F0P0C
sp|B9SQ16_RICCO#Phd/F-box containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0643160#GO:0008270#1F0P0C
Repeat List (scaffold1753)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15541.1	3	235	241	78.83	233	82	1e-104
Target_name	Start	End	Length	Cov(%)
sp\|C6T7X8_SOYBN	4	235	238	97.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15541.1	3	235	241	75.93	233	79	3e-95
Target_name	Start	End	Length	Cov(%)
AT5G05610.1	5	238	241	97.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1753	Augus-PASA	mRNA	28828	32492	.	-	.	ID=Dca15541.1;Parent=Dca15541
scaffold1753	Augus-PASA	exon	28828	29088	.	-	.	ID=Dca15541.1.exon1;Parent=Dca15541.1
scaffold1753	Augus-PASA	exon	30008	30128	.	-	.	ID=Dca15541.1.exon2;Parent=Dca15541.1
scaffold1753	Augus-PASA	exon	31052	31274	.	-	.	ID=Dca15541.1.exon3;Parent=Dca15541.1
scaffold1753	Augus-PASA	exon	32234	32266	.	-	.	ID=Dca15541.1.exon4;Parent=Dca15541.1
scaffold1753	Augus-PASA	exon	32405	32492	.	-	.	ID=Dca15541.1.exon5;Parent=Dca15541.1