Carnation DB

Dca1560.1

Annotation

6-exons
f-1
sp|B9S1H0_RICCO#Ferredoxin-2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0864990#GO:0051537;GO:0009055;GO:0046872;GO:0022900#3F1P0C
Repeat List (scaffold1048)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1560.1	7	183	183	68.85	177	70	8e-69
Target_name	Start	End	Length	Cov(%)
sp\|B9S1H0_RICCO	5	186	186	97.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1560.1	13	183	183	65.57	171	69	4e-67
Target_name	Start	End	Length	Cov(%)
Os03t0685000-01	17	183	184	90.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1048	Augustus	mRNA	42888	47008	.	+	.	ID=Dca1560.1;Parent=Dca1560
scaffold1048	Augustus	exon	42888	43127	.	+	.	ID=Dca1560.1.exon1;Parent=Dca1560.1
scaffold1048	Augustus	exon	43517	43580	.	+	.	ID=Dca1560.1.exon2;Parent=Dca1560.1
scaffold1048	Augustus	exon	45699	45787	.	+	.	ID=Dca1560.1.exon3;Parent=Dca1560.1
scaffold1048	Augustus	exon	46086	46154	.	+	.	ID=Dca1560.1.exon4;Parent=Dca1560.1
scaffold1048	Augustus	exon	46782	46826	.	+	.	ID=Dca1560.1.exon5;Parent=Dca1560.1
scaffold1048	Augustus	exon	46964	47008	.	+	.	ID=Dca1560.1.exon6;Parent=Dca1560.1