Carnation DB

Dca1561.1

Annotation

5-exons
f-1
sp|F6HTB1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g00990#unknown#0F0P0C
AT1G32540.1 | Symbols: LOL1 | lsd one like 1 | chr1:11768253-11769591 FORWARD LENGTH=187
Repeat List (scaffold1048)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1561.1	1	146	148	87.16	146	89	1e-68
Target_name	Start	End	Length	Cov(%)
sp\|F6HTB1_VITVI	47	190	191	75.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1561.1	21	147	148	75	127	88	4e-61
Target_name	Start	End	Length	Cov(%)
AT1G32540.1	61	187	187	67.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1048	Augus-PASA	mRNA	49087	52130	.	-	.	ID=Dca1561.1;Parent=Dca1561
scaffold1048	Augus-PASA	exon	49087	49128	.	-	.	ID=Dca1561.1.exon1;Parent=Dca1561.1
scaffold1048	Augus-PASA	exon	50784	50893	.	-	.	ID=Dca1561.1.exon2;Parent=Dca1561.1
scaffold1048	Augus-PASA	exon	51005	51118	.	-	.	ID=Dca1561.1.exon3;Parent=Dca1561.1
scaffold1048	Augus-PASA	exon	51408	51521	.	-	.	ID=Dca1561.1.exon4;Parent=Dca1561.1
scaffold1048	Augustus	exon	52064	52130	.	-	.	ID=Dca1561.1.exon5;Parent=Dca1561.1