Dca1580.1
Annotation
- 4-exons
- f-1
- sp|D7LYW9_ARALL#Elongation factor Ts, mitochondrial#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=EFTS#GO:0005622;GO:0003746#1F0P1C
- Repeat List (scaffold1049)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1580.1 |
24 |
225 |
225 |
52 |
202 |
58 |
5e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LYW9_ARALL |
46 |
249 |
394 |
51.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1580.1 |
24 |
225 |
225 |
55.11 |
202 |
62 |
8e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0399600-01 |
111 |
307 |
442 |
44.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1049 |
Augustus |
mRNA |
37401 |
39448 |
. |
- |
. |
ID=Dca1580.1;Parent=Dca1580 |
| scaffold1049 |
Augustus |
exon |
37401 |
37580 |
. |
- |
. |
ID=Dca1580.1.exon1;Parent=Dca1580.1 |
| scaffold1049 |
Augus-PASA |
exon |
37669 |
37755 |
. |
- |
. |
ID=Dca1580.1.exon2;Parent=Dca1580.1 |
| scaffold1049 |
Augus-PASA |
exon |
38686 |
38858 |
. |
- |
. |
ID=Dca1580.1.exon3;Parent=Dca1580.1 |
| scaffold1049 |
Augus-PASA |
exon |
39211 |
39448 |
. |
- |
. |
ID=Dca1580.1.exon4;Parent=Dca1580.1 |
