Carnation DB

Dca15944.1

Annotation

5-exons
f-1
sp|B9N0B4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_783148#unknown#0F0P0C
AT5G07900.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405
Repeat List (scaffold1782)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15944.1	40	285	494	19.23	246	39	7e-50
Target_name	Start	End	Length	Cov(%)
sp\|B9N0B4_POPTR	17	261	364	67.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15944.1	26	284	494	17.61	259	33	7e-34
Target_name	Start	End	Length	Cov(%)
AT5G07900.1	48	307	405	64.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1782	Augustus	mRNA	31397	34526	.	+	.	ID=Dca15944.1;Parent=Dca15944
scaffold1782	Augustus	exon	31397	32240	.	+	.	ID=Dca15944.1.exon1;Parent=Dca15944.1
scaffold1782	Augustus	exon	33116	33267	.	+	.	ID=Dca15944.1.exon2;Parent=Dca15944.1
scaffold1782	Augustus	exon	33381	33631	.	+	.	ID=Dca15944.1.exon3;Parent=Dca15944.1
scaffold1782	Augustus	exon	34029	34158	.	+	.	ID=Dca15944.1.exon4;Parent=Dca15944.1
scaffold1782	Augustus	exon	34419	34526	.	+	.	ID=Dca15944.1.exon5;Parent=Dca15944.1