Carnation DB

Dca16004.1

Annotation

6-exons
f-1
sp|F6H0I6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g01930#GO:0005524;GO:0004672;GO:0008270#3F0P0C
sp|B9S2U6_RICCO#Protein translocase subunit SecA#Ricinus communis (Castor bean)#ORFNames=RCOM_0562390#GO:0016020;GO:0005524;GO:0016772;GO:0008270;GO:0017038;GO:0006605#3F2P1C
Repeat List (scaffold1787)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16004.1	3	614	654	42.2	612	44	3e-130
Target_name	Start	End	Length	Cov(%)
sp\|F6H0I6_VITVI	184	760	830	69.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16004.1	1	614	654	36.69	614	39	2e-114
Target_name	Start	End	Length	Cov(%)
AT1G21650.3	171	736	1805	31.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1787	Augustus	mRNA	27994	33893	.	+	.	ID=Dca16004.1;Parent=Dca16004
scaffold1787	Augustus	exon	27994	29083	.	+	.	ID=Dca16004.1.exon1;Parent=Dca16004.1
scaffold1787	Augustus	exon	29851	29994	.	+	.	ID=Dca16004.1.exon2;Parent=Dca16004.1
scaffold1787	Augustus	exon	30882	30937	.	+	.	ID=Dca16004.1.exon3;Parent=Dca16004.1
scaffold1787	Augustus	exon	32039	32311	.	+	.	ID=Dca16004.1.exon4;Parent=Dca16004.1
scaffold1787	Augustus	exon	32409	32645	.	+	.	ID=Dca16004.1.exon5;Parent=Dca16004.1
scaffold1787	Augustus	exon	33729	33893	.	+	.	ID=Dca16004.1.exon6;Parent=Dca16004.1