Carnation DB

Dca16007.1

Annotation

6-exons
f-1
sp|Q3I6J2_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
Repeat List (scaffold1787)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16007.1	108	305	713	10.51	198	33	1e-32
Target_name	Start	End	Length	Cov(%)
sp\|Q3I6J2_SILLA	106	336	555	41.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16007.1	135	251	713	6.31	117	37	5e-12
Target_name	Start	End	Length	Cov(%)
Os06t0165300-00	83	197	267	43.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1787	Augustus	mRNA	52778	55866	.	+	.	ID=Dca16007.1;Parent=Dca16007
scaffold1787	Augustus	exon	52778	53524	.	+	.	ID=Dca16007.1.exon1;Parent=Dca16007.1
scaffold1787	Augustus	exon	53624	53780	.	+	.	ID=Dca16007.1.exon2;Parent=Dca16007.1
scaffold1787	Augustus	exon	53885	54151	.	+	.	ID=Dca16007.1.exon3;Parent=Dca16007.1
scaffold1787	Augustus	exon	54507	54940	.	+	.	ID=Dca16007.1.exon4;Parent=Dca16007.1
scaffold1787	Augustus	exon	55089	55225	.	+	.	ID=Dca16007.1.exon5;Parent=Dca16007.1
scaffold1787	Augustus	exon	55467	55866	.	+	.	ID=Dca16007.1.exon6;Parent=Dca16007.1