Dca16019.1
Annotation
- 3-exons
- f-3
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold17882)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16019.1 |
1 |
203 |
226 |
65.48 |
203 |
65 |
6e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
743 |
971 |
1717 |
13.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16019.1 |
94 |
211 |
226 |
16.37 |
118 |
31 |
7e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
237 |
337 |
707 |
14.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold17882 |
Augustus |
mRNA |
1 |
3179 |
. |
+ |
. |
ID=Dca16019.1;Parent=Dca16019 |
| scaffold17882 |
Augustus |
exon |
1 |
128 |
. |
+ |
. |
ID=Dca16019.1.exon1;Parent=Dca16019.1 |
| scaffold17882 |
Augustus |
exon |
207 |
691 |
. |
+ |
. |
ID=Dca16019.1.exon2;Parent=Dca16019.1 |
| scaffold17882 |
Augustus |
exon |
3110 |
3179 |
. |
+ |
. |
ID=Dca16019.1.exon3;Parent=Dca16019.1 |
