Dca16021.1
Annotation
- 3-exons
- f-1
- sp|D3IVM0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold17886)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16021.1 |
39 |
170 |
172 |
43.6 |
132 |
46 |
6e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVM0_9POAL |
106 |
269 |
454 |
36.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16021.1 |
102 |
162 |
172 |
13.37 |
61 |
38 |
7e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
217 |
276 |
707 |
8.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold17886 |
Augustus |
mRNA |
177 |
2769 |
. |
+ |
. |
ID=Dca16021.1;Parent=Dca16021 |
| scaffold17886 |
Augustus |
exon |
177 |
470 |
. |
+ |
. |
ID=Dca16021.1.exon1;Parent=Dca16021.1 |
| scaffold17886 |
Augustus |
exon |
800 |
989 |
. |
+ |
. |
ID=Dca16021.1.exon2;Parent=Dca16021.1 |
| scaffold17886 |
Augustus |
exon |
2735 |
2769 |
. |
+ |
. |
ID=Dca16021.1.exon3;Parent=Dca16021.1 |
