Carnation DB

Dca16043.1

Annotation

8-exons
f-1
sp|D7SVK7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0068g01460#GO:0005524;GO:0004765#2F0P0C
AT3G26900.1 | Symbols: SKL1, ATSKL1 | shikimate kinase like 1 | chr3:9912314-9914424 REVERSE LENGTH=280
Repeat List (scaffold179)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16043.1	37	263	404	29.7	227	46	1e-46
Target_name	Start	End	Length	Cov(%)
sp\|D7SVK7_VITVI	25	286	305	85.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16043.1	119	263	404	21.53	145	58	1e-38
Target_name	Start	End	Length	Cov(%)
AT3G26900.1	119	261	280	51.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold179	Augustus	mRNA	67607	72154	.	+	.	ID=Dca16043.1;Parent=Dca16043
scaffold179	Augustus	exon	67607	67811	.	+	.	ID=Dca16043.1.exon1;Parent=Dca16043.1
scaffold179	Augustus	exon	68631	68698	.	+	.	ID=Dca16043.1.exon2;Parent=Dca16043.1
scaffold179	Augustus	exon	69330	69503	.	+	.	ID=Dca16043.1.exon3;Parent=Dca16043.1
scaffold179	Augustus	exon	70200	70282	.	+	.	ID=Dca16043.1.exon4;Parent=Dca16043.1
scaffold179	Augustus	exon	70382	70487	.	+	.	ID=Dca16043.1.exon5;Parent=Dca16043.1
scaffold179	Augustus	exon	70578	70656	.	+	.	ID=Dca16043.1.exon6;Parent=Dca16043.1
scaffold179	Augustus	exon	70745	70809	.	+	.	ID=Dca16043.1.exon7;Parent=Dca16043.1
scaffold179	Augustus	exon	71720	72154	.	+	.	ID=Dca16043.1.exon8;Parent=Dca16043.1