Carnation DB

Dca16080.1

Annotation

8-exons
f-1
sp|A5B919_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002640#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold1790)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16080.1	1	1407	1407	54.44	1407	53	0
Target_name	Start	End	Length	Cov(%)
sp\|A5B919_VITVI	2	1443	1450	99.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16080.1	337	1404	1407	27	1068	34	2e-158
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	336	1389	1401	75.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1790	Augustus	mRNA	51543	59147	.	-	.	ID=Dca16080.1;Parent=Dca16080
scaffold1790	Augustus	exon	51543	51950	.	-	.	ID=Dca16080.1.exon1;Parent=Dca16080.1
scaffold1790	Augustus	exon	52101	52346	.	-	.	ID=Dca16080.1.exon2;Parent=Dca16080.1
scaffold1790	Augustus	exon	53138	53260	.	-	.	ID=Dca16080.1.exon3;Parent=Dca16080.1
scaffold1790	Augustus	exon	53347	53424	.	-	.	ID=Dca16080.1.exon4;Parent=Dca16080.1
scaffold1790	Augustus	exon	53523	53618	.	-	.	ID=Dca16080.1.exon5;Parent=Dca16080.1
scaffold1790	Augustus	exon	53979	54010	.	-	.	ID=Dca16080.1.exon6;Parent=Dca16080.1
scaffold1790	Augustus	exon	54863	55351	.	-	.	ID=Dca16080.1.exon7;Parent=Dca16080.1
scaffold1790	Augustus	exon	55415	59147	.	-	.	ID=Dca16080.1.exon8;Parent=Dca16080.1