Carnation DB

Dca16092.1

Annotation

7-exons
f-144
sp|A9PA16_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_831873#GO:0016272;GO:0051082;GO:0006457#1F1P1C
sp|B9SAB9_RICCO#Prefoldin subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1237470#GO:0016272;GO:0051082;GO:0006457#1F1P1C
Repeat List (scaffold1791)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16092.1	1	129	129	82.17	129	83	3e-56
Target_name	Start	End	Length	Cov(%)
sp\|A9PA16_POPTR	1	129	129	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16092.1	1	128	129	72.09	128	73	2e-50
Target_name	Start	End	Length	Cov(%)
AT2G07340.1	1	128	128	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1791	PASA	mRNA	39927	42616	.	-	.	ID=Dca16092.1;Parent=Dca16092
scaffold1791	PASA	exon	39927	40209	.	-	.	ID=Dca16092.1.exon1;Parent=Dca16092.1
scaffold1791	PASA	exon	40372	40456	.	-	.	ID=Dca16092.1.exon2;Parent=Dca16092.1
scaffold1791	PASA	exon	40600	40606	.	-	.	ID=Dca16092.1.exon3;Parent=Dca16092.1
scaffold1791	PASA	exon	40878	40983	.	-	.	ID=Dca16092.1.exon4;Parent=Dca16092.1
scaffold1791	PASA	exon	41601	41654	.	-	.	ID=Dca16092.1.exon5;Parent=Dca16092.1
scaffold1791	PASA	exon	41955	42022	.	-	.	ID=Dca16092.1.exon6;Parent=Dca16092.1
scaffold1791	PASA	exon	42518	42616	.	-	.	ID=Dca16092.1.exon7;Parent=Dca16092.1