Dca16128.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1794)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16128.1 |
60 |
333 |
805 |
10.06 |
274 |
30 |
5e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
33 |
289 |
1501 |
17.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16128.1 |
405 |
797 |
805 |
21.36 |
393 |
44 |
1e-96
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
179 |
574 |
707 |
56.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1794 |
Augustus |
mRNA |
36815 |
40876 |
. |
- |
. |
ID=Dca16128.1;Parent=Dca16128 |
| scaffold1794 |
Augustus |
exon |
36815 |
38106 |
. |
- |
. |
ID=Dca16128.1.exon1;Parent=Dca16128.1 |
| scaffold1794 |
Augustus |
exon |
38400 |
39463 |
. |
- |
. |
ID=Dca16128.1.exon2;Parent=Dca16128.1 |
| scaffold1794 |
Augustus |
exon |
40815 |
40876 |
. |
- |
. |
ID=Dca16128.1.exon3;Parent=Dca16128.1 |
