Carnation DB

Dca16146.1

Annotation

26-exons
f-1
sp|B9IJY0_POPTR#Structural maintenance of chromosomes protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CPC901#GO:0005694;GO:0005634;GO:0005524;GO:0030261;GO:0006310;GO:0006281;GO:0007062#1F4P2C
Repeat List (scaffold1796)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16146.1	15	1181	1187	74.38	1167	75	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IJY0_POPTR	12	1192	1256	94.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16146.1	20	1181	1187	69.75	1162	71	0
Target_name	Start	End	Length	Cov(%)
AT5G48600.2	12	1179	1244	93.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1796	Augustus	mRNA	29181	38314	.	-	.	ID=Dca16146.1;Parent=Dca16146
scaffold1796	Augustus	exon	29181	29288	.	-	.	ID=Dca16146.1.exon1;Parent=Dca16146.1
scaffold1796	Augustus	exon	29373	29507	.	-	.	ID=Dca16146.1.exon2;Parent=Dca16146.1
scaffold1796	Augustus	exon	30181	30241	.	-	.	ID=Dca16146.1.exon3;Parent=Dca16146.1
scaffold1796	Augustus	exon	30348	30431	.	-	.	ID=Dca16146.1.exon4;Parent=Dca16146.1
scaffold1796	Augustus	exon	30513	30668	.	-	.	ID=Dca16146.1.exon5;Parent=Dca16146.1
scaffold1796	Augustus	exon	30746	30867	.	-	.	ID=Dca16146.1.exon6;Parent=Dca16146.1
scaffold1796	Augustus	exon	30947	31036	.	-	.	ID=Dca16146.1.exon7;Parent=Dca16146.1
scaffold1796	Augustus	exon	31133	31342	.	-	.	ID=Dca16146.1.exon8;Parent=Dca16146.1
scaffold1796	Augustus	exon	31432	31515	.	-	.	ID=Dca16146.1.exon9;Parent=Dca16146.1
scaffold1796	Augustus	exon	31695	31871	.	-	.	ID=Dca16146.1.exon10;Parent=Dca16146.1
scaffold1796	Augustus	exon	31963	32271	.	-	.	ID=Dca16146.1.exon11;Parent=Dca16146.1
scaffold1796	Augustus	exon	32661	32819	.	-	.	ID=Dca16146.1.exon12;Parent=Dca16146.1
scaffold1796	Augustus	exon	33895	34028	.	-	.	ID=Dca16146.1.exon13;Parent=Dca16146.1
scaffold1796	Augustus	exon	34168	34357	.	-	.	ID=Dca16146.1.exon14;Parent=Dca16146.1
scaffold1796	Augustus	exon	34481	34633	.	-	.	ID=Dca16146.1.exon15;Parent=Dca16146.1
scaffold1796	Augustus	exon	34876	35006	.	-	.	ID=Dca16146.1.exon16;Parent=Dca16146.1
scaffold1796	Augustus	exon	35467	35611	.	-	.	ID=Dca16146.1.exon17;Parent=Dca16146.1
scaffold1796	Augustus	exon	35679	35807	.	-	.	ID=Dca16146.1.exon18;Parent=Dca16146.1
scaffold1796	Augustus	exon	35956	36031	.	-	.	ID=Dca16146.1.exon19;Parent=Dca16146.1
scaffold1796	Augustus	exon	36114	36271	.	-	.	ID=Dca16146.1.exon20;Parent=Dca16146.1
scaffold1796	Augustus	exon	36349	36427	.	-	.	ID=Dca16146.1.exon21;Parent=Dca16146.1
scaffold1796	Augustus	exon	36914	37044	.	-	.	ID=Dca16146.1.exon22;Parent=Dca16146.1
scaffold1796	Augustus	exon	37158	37334	.	-	.	ID=Dca16146.1.exon23;Parent=Dca16146.1
scaffold1796	Augustus	exon	37427	37528	.	-	.	ID=Dca16146.1.exon24;Parent=Dca16146.1
scaffold1796	Augustus	exon	37941	38030	.	-	.	ID=Dca16146.1.exon25;Parent=Dca16146.1
scaffold1796	Augustus	exon	38141	38314	.	-	.	ID=Dca16146.1.exon26;Parent=Dca16146.1